biotin 1d4c5 fluidigm 3150008b il 10 jes3 biolegend 501502 biotin (fluidigm)
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biotin 1d4c5 fluidigm 3150008b il 10 jes3 biolegend 501502 biotin
Biotin 1d4c5 Fluidigm 3150008b Il 10 Jes3 Biolegend 501502 Biotin, supplied by fluidigm, used in various techniques. Bioz Stars score: 93/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/maxpar+x8+antibody+labeling+kit+fluidigm/Maxpar+X8+Antibody+Labeling+Kit%2C+149Sm/us12521393-2842-140-142
Average 93 stars, based on 7 article reviews
Biotin 1d4c5 Fluidigm 3150008b Il 10 Jes3 Biolegend 501502 Biotin, supplied by fluidigm, used in various techniques. Bioz Stars score: 93/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/maxpar+x8+antibody+labeling+kit+fluidigm/Maxpar+X8+Antibody+Labeling+Kit%2C+149Sm/us12521393-2842-140-142
Average 93 stars, based on 7 article reviews
biotin 1d4c5 fluidigm 3150008b il 10 jes3 biolegend 501502 biotin - by Bioz Stars,
2026-09
93/100 stars
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Cytometry:Article Title: An Integrated Multi-omic Single-Cell Atlas of Human B Cell Identity Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Goat F(ab’)2 Anti-Human Kappa-UNLB Southern Biotech Cat#2062-01; RRID: AB_2795736 All antibodies used for cytometry Various Table S1 Biological Samples Leukocyte reduction chamber from human blood Stanford Blood Center stanfordbloodcenter.org Whole blood from healthy donors Obtained under informed consent with IRB approval n/a Human tonsil Stanford Hospital, adult tonsilectomy from adults with obstructive sleep apnea stanfordhealthcare.org Human lymph node Stanford Hosptial, biopsy sample of recovered lymphoma patient stanfordhealthcare.org Human bone marrow from healthy donors AllCells allcells.com Chemicals, Peptides, and Recombinant Proteins Ficoll-Paque Plus GE Healthcare Cat#300-25 RPMI 1640 media Thermo Fisher Scientific Cat#21-870-092 GlutaMAX supplement Thermo Fisher Scientific Cat#35050-061 Fetal bovine serum USDA approved lot Omega Scientific, Inc. Cat#FB-01 Benzonase nuclease Sigma-Aldrich Cat#E1014-25KU Recombinant human CD40L BioLegend Cat#591704 Human TruStain FcX (Fc Receptor Blocking Solution) BioLegend Cat#422302 Bovine Serum Album (BSA) Heat-shock Treated Thermo Fisher Scientific Cat#BP1600-100 Cell-ID Intercalator-Ir Fluidigm Cat#201192A Cell-ID Cisplatin Fluidigm Cat#201064 Saponin from quillaja bark Sigma-Aldrich Cat#S7900-25G Calibration Beads, EQ, Four Element Fluidigm Cat#201078 7-AAD Viability Staining Solution BioLegend Cat#420404 Streptavidin Particles Plus BD Biosciences Cat#557812 Critical Commercial Assays Cell-ID 20-Plex Pd Barcoding Kit Fluidigm Cat#201060 Recombinant:Article Title: An Integrated Multi-omic Single-Cell Atlas of Human B Cell Identity Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Goat F(ab’)2 Anti-Human Kappa-UNLB Southern Biotech Cat#2062-01; RRID: AB_2795736 All antibodies used for cytometry Various Table S1 Biological Samples Leukocyte reduction chamber from human blood Stanford Blood Center stanfordbloodcenter.org Whole blood from healthy donors Obtained under informed consent with IRB approval n/a Human tonsil Stanford Hospital, adult tonsilectomy from adults with obstructive sleep apnea stanfordhealthcare.org Human lymph node Stanford Hosptial, biopsy sample of recovered lymphoma patient stanfordhealthcare.org Human bone marrow from healthy donors AllCells allcells.com Chemicals, Peptides, and Recombinant Proteins Ficoll-Paque Plus GE Healthcare Cat#300-25 RPMI 1640 media Thermo Fisher Scientific Cat#21-870-092 GlutaMAX supplement Thermo Fisher Scientific Cat#35050-061 Fetal bovine serum USDA approved lot Omega Scientific, Inc. Cat#FB-01 Benzonase nuclease Sigma-Aldrich Cat#E1014-25KU Recombinant human CD40L BioLegend Cat#591704 Human TruStain FcX (Fc Receptor Blocking Solution) BioLegend Cat#422302 Bovine Serum Album (BSA) Heat-shock Treated Thermo Fisher Scientific Cat#BP1600-100 Cell-ID Intercalator-Ir Fluidigm Cat#201192A Cell-ID Cisplatin Fluidigm Cat#201064 Saponin from quillaja bark Sigma-Aldrich Cat#S7900-25G Calibration Beads, EQ, Four Element Fluidigm Cat#201078 7-AAD Viability Staining Solution BioLegend Cat#420404 Streptavidin Particles Plus BD Biosciences Cat#557812 Critical Commercial Assays Cell-ID 20-Plex Pd Barcoding Kit Fluidigm Cat#201060 Blocking Assay:Article Title: An Integrated Multi-omic Single-Cell Atlas of Human B Cell Identity Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Goat F(ab’)2 Anti-Human Kappa-UNLB Southern Biotech Cat#2062-01; RRID: AB_2795736 All antibodies used for cytometry Various Table S1 Biological Samples Leukocyte reduction chamber from human blood Stanford Blood Center stanfordbloodcenter.org Whole blood from healthy donors Obtained under informed consent with IRB approval n/a Human tonsil Stanford Hospital, adult tonsilectomy from adults with obstructive sleep apnea stanfordhealthcare.org Human lymph node Stanford Hosptial, biopsy sample of recovered lymphoma patient stanfordhealthcare.org Human bone marrow from healthy donors AllCells allcells.com Chemicals, Peptides, and Recombinant Proteins Ficoll-Paque Plus GE Healthcare Cat#300-25 RPMI 1640 media Thermo Fisher Scientific Cat#21-870-092 GlutaMAX supplement Thermo Fisher Scientific Cat#35050-061 Fetal bovine serum USDA approved lot Omega Scientific, Inc. Cat#FB-01 Benzonase nuclease Sigma-Aldrich Cat#E1014-25KU Recombinant human CD40L BioLegend Cat#591704 Human TruStain FcX (Fc Receptor Blocking Solution) BioLegend Cat#422302 Bovine Serum Album (BSA) Heat-shock Treated Thermo Fisher Scientific Cat#BP1600-100 Cell-ID Intercalator-Ir Fluidigm Cat#201192A Cell-ID Cisplatin Fluidigm Cat#201064 Saponin from quillaja bark Sigma-Aldrich Cat#S7900-25G Calibration Beads, EQ, Four Element Fluidigm Cat#201078 7-AAD Viability Staining Solution BioLegend Cat#420404 Streptavidin Particles Plus BD Biosciences Cat#557812 Critical Commercial Assays Cell-ID 20-Plex Pd Barcoding Kit Fluidigm Cat#201060 Staining:Article Title: An Integrated Multi-omic Single-Cell Atlas of Human B Cell Identity Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Goat F(ab’)2 Anti-Human Kappa-UNLB Southern Biotech Cat#2062-01; RRID: AB_2795736 All antibodies used for cytometry Various Table S1 Biological Samples Leukocyte reduction chamber from human blood Stanford Blood Center stanfordbloodcenter.org Whole blood from healthy donors Obtained under informed consent with IRB approval n/a Human tonsil Stanford Hospital, adult tonsilectomy from adults with obstructive sleep apnea stanfordhealthcare.org Human lymph node Stanford Hosptial, biopsy sample of recovered lymphoma patient stanfordhealthcare.org Human bone marrow from healthy donors AllCells allcells.com Chemicals, Peptides, and Recombinant Proteins Ficoll-Paque Plus GE Healthcare Cat#300-25 RPMI 1640 media Thermo Fisher Scientific Cat#21-870-092 GlutaMAX supplement Thermo Fisher Scientific Cat#35050-061 Fetal bovine serum USDA approved lot Omega Scientific, Inc. Cat#FB-01 Benzonase nuclease Sigma-Aldrich Cat#E1014-25KU Recombinant human CD40L BioLegend Cat#591704 Human TruStain FcX (Fc Receptor Blocking Solution) BioLegend Cat#422302 Bovine Serum Album (BSA) Heat-shock Treated Thermo Fisher Scientific Cat#BP1600-100 Cell-ID Intercalator-Ir Fluidigm Cat#201192A Cell-ID Cisplatin Fluidigm Cat#201064 Saponin from quillaja bark Sigma-Aldrich Cat#S7900-25G Calibration Beads, EQ, Four Element Fluidigm Cat#201078 7-AAD Viability Staining Solution BioLegend Cat#420404 Streptavidin Particles Plus BD Biosciences Cat#557812 Critical Commercial Assays Cell-ID 20-Plex Pd Barcoding Kit Fluidigm Cat#201060 Antibody Labeling:Article Title: An Integrated Multi-omic Single-Cell Atlas of Human B Cell Identity Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Goat F(ab’)2 Anti-Human Kappa-UNLB Southern Biotech Cat#2062-01; RRID: AB_2795736 All antibodies used for cytometry Various Table S1 Biological Samples Leukocyte reduction chamber from human blood Stanford Blood Center stanfordbloodcenter.org Whole blood from healthy donors Obtained under informed consent with IRB approval n/a Human tonsil Stanford Hospital, adult tonsilectomy from adults with obstructive sleep apnea stanfordhealthcare.org Human lymph node Stanford Hosptial, biopsy sample of recovered lymphoma patient stanfordhealthcare.org Human bone marrow from healthy donors AllCells allcells.com Chemicals, Peptides, and Recombinant Proteins Ficoll-Paque Plus GE Healthcare Cat#300-25 RPMI 1640 media Thermo Fisher Scientific Cat#21-870-092 GlutaMAX supplement Thermo Fisher Scientific Cat#35050-061 Fetal bovine serum USDA approved lot Omega Scientific, Inc. Cat#FB-01 Benzonase nuclease Sigma-Aldrich Cat#E1014-25KU Recombinant human CD40L BioLegend Cat#591704 Human TruStain FcX (Fc Receptor Blocking Solution) BioLegend Cat#422302 Bovine Serum Album (BSA) Heat-shock Treated Thermo Fisher Scientific Cat#BP1600-100 Cell-ID Intercalator-Ir Fluidigm Cat#201192A Cell-ID Cisplatin Fluidigm Cat#201064 Saponin from quillaja bark Sigma-Aldrich Cat#S7900-25G Calibration Beads, EQ, Four Element Fluidigm Cat#201078 7-AAD Viability Staining Solution BioLegend Cat#420404 Streptavidin Particles Plus BD Biosciences Cat#557812 Critical Commercial Assays Cell-ID 20-Plex Pd Barcoding Kit Fluidigm Cat#201060 Article Title: The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER GSVA (R package) Hänzelmann et al.59 v1.40.1 fgsea (R package) Korotkevich et al.60 v1.18.0 ggplot2 (R Package; bulk RNA-seq analysis) Wickham et al.61 v3.3.5 ggplot2 (R package; DNA methylation analysis) Wickham et al.61 v3.3.6 pheatmap (R package) Kolde et al.62 v1.0.12 sva (R package) Leek et al.63 v3.44.0 minfi (R package) Fortin et al.64 v1.42.0 limma (R package; DNA methylation analysis) Ritchie et al.65 v3.52.2 limma (R package; bulk RNA-seq analysis) Ritchie et al.65 v3.48.3 methylGSA (R package) Fortin et al.64 v1.14.0 FlowSOM (R package) Van Gassen et al.66 v3.17 uwot (R package) https://cran.r-project.org/web/packages/ uwot/index.html v0.1.8 ComplexHeatmap (R package) Gu et al.67 v1.20.0 FlowJo https://www.flowjo.com v10.8 JMP Pro SAS Institute inc. V 16.2.0 Matching (R package) Sekhon et al.68 v4.9-7 OMIQ www.omiq.ai N/A ll OPEN ACCESS Please cite this article in press as: Knoll et al., The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation, Cell (2024), https://doi.org/10.1016/j.cell.2024.06.014 Article .. REAGENT or RESOURCE SOURCE IDENTIFIER BD Rhapsody cDNA Kit BectonDickinson Cat# 633773 High Sensitivity D5000 ScreenTape Agilent Cat# 5067-5592 High Sensitivity D1000 ScreenTape Agilent Cat# 5067-5584 Qubit dsDNA HS Assay Kit ThermoFisher Cat# Q32851 High Sensitivity DNA Kit Agilent Cat# 5067-4626 NovaSeq 6000 S2 Reagent Kit (200 cycles) Illumina Cat# 20040326 NovaSeq 6000 S4 Reagent Kit (200 cycles) Illumina Cat# 20028313 Chromium Next GEM Single Cell 30 GEM, Library & Gel Bead Kit v3.1 10x Genomics Cat# 1000121 Chromium Next GEM Chip G Single Cell Kit 10x Genomics Cat# 1000120 Single Index Kit T Set A 10x Genomics Cat# 1000213 TruSeq Stranded Total RNA with Ribo-Zero Globin Illumina Cat# 20020613 Mass Cytometry:Article Title: An Integrated Multi-omic Single-Cell Atlas of Human B Cell Identity Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Goat F(ab’)2 Anti-Human Kappa-UNLB Southern Biotech Cat#2062-01; RRID: AB_2795736 All antibodies used for cytometry Various Table S1 Biological Samples Leukocyte reduction chamber from human blood Stanford Blood Center stanfordbloodcenter.org Whole blood from healthy donors Obtained under informed consent with IRB approval n/a Human tonsil Stanford Hospital, adult tonsilectomy from adults with obstructive sleep apnea stanfordhealthcare.org Human lymph node Stanford Hosptial, biopsy sample of recovered lymphoma patient stanfordhealthcare.org Human bone marrow from healthy donors AllCells allcells.com Chemicals, Peptides, and Recombinant Proteins Ficoll-Paque Plus GE Healthcare Cat#300-25 RPMI 1640 media Thermo Fisher Scientific Cat#21-870-092 GlutaMAX supplement Thermo Fisher Scientific Cat#35050-061 Fetal bovine serum USDA approved lot Omega Scientific, Inc. Cat#FB-01 Benzonase nuclease Sigma-Aldrich Cat#E1014-25KU Recombinant human CD40L BioLegend Cat#591704 Human TruStain FcX (Fc Receptor Blocking Solution) BioLegend Cat#422302 Bovine Serum Album (BSA) Heat-shock Treated Thermo Fisher Scientific Cat#BP1600-100 Cell-ID Intercalator-Ir Fluidigm Cat#201192A Cell-ID Cisplatin Fluidigm Cat#201064 Saponin from quillaja bark Sigma-Aldrich Cat#S7900-25G Calibration Beads, EQ, Four Element Fluidigm Cat#201078 7-AAD Viability Staining Solution BioLegend Cat#420404 Streptavidin Particles Plus BD Biosciences Cat#557812 Critical Commercial Assays Cell-ID 20-Plex Pd Barcoding Kit Fluidigm Cat#201060 Software:Article Title: An Integrated Multi-omic Single-Cell Atlas of Human B Cell Identity Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Goat F(ab’)2 Anti-Human Kappa-UNLB Southern Biotech Cat#2062-01; RRID: AB_2795736 All antibodies used for cytometry Various Table S1 Biological Samples Leukocyte reduction chamber from human blood Stanford Blood Center stanfordbloodcenter.org Whole blood from healthy donors Obtained under informed consent with IRB approval n/a Human tonsil Stanford Hospital, adult tonsilectomy from adults with obstructive sleep apnea stanfordhealthcare.org Human lymph node Stanford Hosptial, biopsy sample of recovered lymphoma patient stanfordhealthcare.org Human bone marrow from healthy donors AllCells allcells.com Chemicals, Peptides, and Recombinant Proteins Ficoll-Paque Plus GE Healthcare Cat#300-25 RPMI 1640 media Thermo Fisher Scientific Cat#21-870-092 GlutaMAX supplement Thermo Fisher Scientific Cat#35050-061 Fetal bovine serum USDA approved lot Omega Scientific, Inc. Cat#FB-01 Benzonase nuclease Sigma-Aldrich Cat#E1014-25KU Recombinant human CD40L BioLegend Cat#591704 Human TruStain FcX (Fc Receptor Blocking Solution) BioLegend Cat#422302 Bovine Serum Album (BSA) Heat-shock Treated Thermo Fisher Scientific Cat#BP1600-100 Cell-ID Intercalator-Ir Fluidigm Cat#201192A Cell-ID Cisplatin Fluidigm Cat#201064 Saponin from quillaja bark Sigma-Aldrich Cat#S7900-25G Calibration Beads, EQ, Four Element Fluidigm Cat#201078 7-AAD Viability Staining Solution BioLegend Cat#420404 Streptavidin Particles Plus BD Biosciences Cat#557812 Critical Commercial Assays Cell-ID 20-Plex Pd Barcoding Kit Fluidigm Cat#201060 Article Title: The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER GSVA (R package) Hänzelmann et al.59 v1.40.1 fgsea (R package) Korotkevich et al.60 v1.18.0 ggplot2 (R Package; bulk RNA-seq analysis) Wickham et al.61 v3.3.5 ggplot2 (R package; DNA methylation analysis) Wickham et al.61 v3.3.6 pheatmap (R package) Kolde et al.62 v1.0.12 sva (R package) Leek et al.63 v3.44.0 minfi (R package) Fortin et al.64 v1.42.0 limma (R package; DNA methylation analysis) Ritchie et al.65 v3.52.2 limma (R package; bulk RNA-seq analysis) Ritchie et al.65 v3.48.3 methylGSA (R package) Fortin et al.64 v1.14.0 FlowSOM (R package) Van Gassen et al.66 v3.17 uwot (R package) https://cran.r-project.org/web/packages/ uwot/index.html v0.1.8 ComplexHeatmap (R package) Gu et al.67 v1.20.0 FlowJo https://www.flowjo.com v10.8 JMP Pro SAS Institute inc. V 16.2.0 Matching (R package) Sekhon et al.68 v4.9-7 OMIQ www.omiq.ai N/A ll OPEN ACCESS Please cite this article in press as: Knoll et al., The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation, Cell (2024), https://doi.org/10.1016/j.cell.2024.06.014 Article .. REAGENT or RESOURCE SOURCE IDENTIFIER BD Rhapsody cDNA Kit BectonDickinson Cat# 633773 High Sensitivity D5000 ScreenTape Agilent Cat# 5067-5592 High Sensitivity D1000 ScreenTape Agilent Cat# 5067-5584 Qubit dsDNA HS Assay Kit ThermoFisher Cat# Q32851 High Sensitivity DNA Kit Agilent Cat# 5067-4626 NovaSeq 6000 S2 Reagent Kit (200 cycles) Illumina Cat# 20040326 NovaSeq 6000 S4 Reagent Kit (200 cycles) Illumina Cat# 20028313 Chromium Next GEM Single Cell 30 GEM, Library & Gel Bead Kit v3.1 10x Genomics Cat# 1000121 Chromium Next GEM Chip G Single Cell Kit 10x Genomics Cat# 1000120 Single Index Kit T Set A 10x Genomics Cat# 1000213 TruSeq Stranded Total RNA with Ribo-Zero Globin Illumina Cat# 20020613 Methylation:Article Title: The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER GSVA (R package) Hänzelmann et al.59 v1.40.1 fgsea (R package) Korotkevich et al.60 v1.18.0 ggplot2 (R Package; bulk RNA-seq analysis) Wickham et al.61 v3.3.5 ggplot2 (R package; DNA methylation analysis) Wickham et al.61 v3.3.6 pheatmap (R package) Kolde et al.62 v1.0.12 sva (R package) Leek et al.63 v3.44.0 minfi (R package) Fortin et al.64 v1.42.0 limma (R package; DNA methylation analysis) Ritchie et al.65 v3.52.2 limma (R package; bulk RNA-seq analysis) Ritchie et al.65 v3.48.3 methylGSA (R package) Fortin et al.64 v1.14.0 FlowSOM (R package) Van Gassen et al.66 v3.17 uwot (R package) https://cran.r-project.org/web/packages/ uwot/index.html v0.1.8 ComplexHeatmap (R package) Gu et al.67 v1.20.0 FlowJo https://www.flowjo.com v10.8 JMP Pro SAS Institute inc. V 16.2.0 Matching (R package) Sekhon et al.68 v4.9-7 OMIQ www.omiq.ai N/A ll OPEN ACCESS Please cite this article in press as: Knoll et al., The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation, Cell (2024), https://doi.org/10.1016/j.cell.2024.06.014 Article .. REAGENT or RESOURCE SOURCE IDENTIFIER BD Rhapsody cDNA Kit BectonDickinson Cat# 633773 High Sensitivity D5000 ScreenTape Agilent Cat# 5067-5592 High Sensitivity D1000 ScreenTape Agilent Cat# 5067-5584 Qubit dsDNA HS Assay Kit ThermoFisher Cat# Q32851 High Sensitivity DNA Kit Agilent Cat# 5067-4626 NovaSeq 6000 S2 Reagent Kit (200 cycles) Illumina Cat# 20040326 NovaSeq 6000 S4 Reagent Kit (200 cycles) Illumina Cat# 20028313 Chromium Next GEM Single Cell 30 GEM, Library & Gel Bead Kit v3.1 10x Genomics Cat# 1000121 Chromium Next GEM Chip G Single Cell Kit 10x Genomics Cat# 1000120 Single Index Kit T Set A 10x Genomics Cat# 1000213 TruSeq Stranded Total RNA with Ribo-Zero Globin Illumina Cat# 20020613 Microarray:Article Title: The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER GSVA (R package) Hänzelmann et al.59 v1.40.1 fgsea (R package) Korotkevich et al.60 v1.18.0 ggplot2 (R Package; bulk RNA-seq analysis) Wickham et al.61 v3.3.5 ggplot2 (R package; DNA methylation analysis) Wickham et al.61 v3.3.6 pheatmap (R package) Kolde et al.62 v1.0.12 sva (R package) Leek et al.63 v3.44.0 minfi (R package) Fortin et al.64 v1.42.0 limma (R package; DNA methylation analysis) Ritchie et al.65 v3.52.2 limma (R package; bulk RNA-seq analysis) Ritchie et al.65 v3.48.3 methylGSA (R package) Fortin et al.64 v1.14.0 FlowSOM (R package) Van Gassen et al.66 v3.17 uwot (R package) https://cran.r-project.org/web/packages/ uwot/index.html v0.1.8 ComplexHeatmap (R package) Gu et al.67 v1.20.0 FlowJo https://www.flowjo.com v10.8 JMP Pro SAS Institute inc. V 16.2.0 Matching (R package) Sekhon et al.68 v4.9-7 OMIQ www.omiq.ai N/A ll OPEN ACCESS Please cite this article in press as: Knoll et al., The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation, Cell (2024), https://doi.org/10.1016/j.cell.2024.06.014 Article .. REAGENT or RESOURCE SOURCE IDENTIFIER BD Rhapsody cDNA Kit BectonDickinson Cat# 633773 High Sensitivity D5000 ScreenTape Agilent Cat# 5067-5592 High Sensitivity D1000 ScreenTape Agilent Cat# 5067-5584 Qubit dsDNA HS Assay Kit ThermoFisher Cat# Q32851 High Sensitivity DNA Kit Agilent Cat# 5067-4626 NovaSeq 6000 S2 Reagent Kit (200 cycles) Illumina Cat# 20040326 NovaSeq 6000 S4 Reagent Kit (200 cycles) Illumina Cat# 20028313 Chromium Next GEM Single Cell 30 GEM, Library & Gel Bead Kit v3.1 10x Genomics Cat# 1000121 Chromium Next GEM Chip G Single Cell Kit 10x Genomics Cat# 1000120 Single Index Kit T Set A 10x Genomics Cat# 1000213 TruSeq Stranded Total RNA with Ribo-Zero Globin Illumina Cat# 20020613 RNA Sequencing:Article Title: The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER GSVA (R package) Hänzelmann et al.59 v1.40.1 fgsea (R package) Korotkevich et al.60 v1.18.0 ggplot2 (R Package; bulk RNA-seq analysis) Wickham et al.61 v3.3.5 ggplot2 (R package; DNA methylation analysis) Wickham et al.61 v3.3.6 pheatmap (R package) Kolde et al.62 v1.0.12 sva (R package) Leek et al.63 v3.44.0 minfi (R package) Fortin et al.64 v1.42.0 limma (R package; DNA methylation analysis) Ritchie et al.65 v3.52.2 limma (R package; bulk RNA-seq analysis) Ritchie et al.65 v3.48.3 methylGSA (R package) Fortin et al.64 v1.14.0 FlowSOM (R package) Van Gassen et al.66 v3.17 uwot (R package) https://cran.r-project.org/web/packages/ uwot/index.html v0.1.8 ComplexHeatmap (R package) Gu et al.67 v1.20.0 FlowJo https://www.flowjo.com v10.8 JMP Pro SAS Institute inc. V 16.2.0 Matching (R package) Sekhon et al.68 v4.9-7 OMIQ www.omiq.ai N/A ll OPEN ACCESS Please cite this article in press as: Knoll et al., The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation, Cell (2024), https://doi.org/10.1016/j.cell.2024.06.014 Article .. REAGENT or RESOURCE SOURCE IDENTIFIER BD Rhapsody cDNA Kit BectonDickinson Cat# 633773 High Sensitivity D5000 ScreenTape Agilent Cat# 5067-5592 High Sensitivity D1000 ScreenTape Agilent Cat# 5067-5584 Qubit dsDNA HS Assay Kit ThermoFisher Cat# Q32851 High Sensitivity DNA Kit Agilent Cat# 5067-4626 NovaSeq 6000 S2 Reagent Kit (200 cycles) Illumina Cat# 20040326 NovaSeq 6000 S4 Reagent Kit (200 cycles) Illumina Cat# 20028313 Chromium Next GEM Single Cell 30 GEM, Library & Gel Bead Kit v3.1 10x Genomics Cat# 1000121 Chromium Next GEM Chip G Single Cell Kit 10x Genomics Cat# 1000120 Single Index Kit T Set A 10x Genomics Cat# 1000213 TruSeq Stranded Total RNA with Ribo-Zero Globin Illumina Cat# 20020613 DNA Methylation Assay:Article Title: The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER GSVA (R package) Hänzelmann et al.59 v1.40.1 fgsea (R package) Korotkevich et al.60 v1.18.0 ggplot2 (R Package; bulk RNA-seq analysis) Wickham et al.61 v3.3.5 ggplot2 (R package; DNA methylation analysis) Wickham et al.61 v3.3.6 pheatmap (R package) Kolde et al.62 v1.0.12 sva (R package) Leek et al.63 v3.44.0 minfi (R package) Fortin et al.64 v1.42.0 limma (R package; DNA methylation analysis) Ritchie et al.65 v3.52.2 limma (R package; bulk RNA-seq analysis) Ritchie et al.65 v3.48.3 methylGSA (R package) Fortin et al.64 v1.14.0 FlowSOM (R package) Van Gassen et al.66 v3.17 uwot (R package) https://cran.r-project.org/web/packages/ uwot/index.html v0.1.8 ComplexHeatmap (R package) Gu et al.67 v1.20.0 FlowJo https://www.flowjo.com v10.8 JMP Pro SAS Institute inc. V 16.2.0 Matching (R package) Sekhon et al.68 v4.9-7 OMIQ www.omiq.ai N/A ll OPEN ACCESS Please cite this article in press as: Knoll et al., The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation, Cell (2024), https://doi.org/10.1016/j.cell.2024.06.014 Article .. REAGENT or RESOURCE SOURCE IDENTIFIER BD Rhapsody cDNA Kit BectonDickinson Cat# 633773 High Sensitivity D5000 ScreenTape Agilent Cat# 5067-5592 High Sensitivity D1000 ScreenTape Agilent Cat# 5067-5584 Qubit dsDNA HS Assay Kit ThermoFisher Cat# Q32851 High Sensitivity DNA Kit Agilent Cat# 5067-4626 NovaSeq 6000 S2 Reagent Kit (200 cycles) Illumina Cat# 20040326 NovaSeq 6000 S4 Reagent Kit (200 cycles) Illumina Cat# 20028313 Chromium Next GEM Single Cell 30 GEM, Library & Gel Bead Kit v3.1 10x Genomics Cat# 1000121 Chromium Next GEM Chip G Single Cell Kit 10x Genomics Cat# 1000120 Single Index Kit T Set A 10x Genomics Cat# 1000213 TruSeq Stranded Total RNA with Ribo-Zero Globin Illumina Cat# 20020613 |